PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01886.1.g00070.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 341aa    MW: 36326.7 Da    PI: 5.3113
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01886.1.g00070.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.75.9e-18131181155
                           AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                                   ++++GVr +k +g+++AeIr p+    r +r +lg+f+taeeAa+ ++a++++++g
  Zpz_sc01886.1.g00070.1.am.mk 131 PKFRGVRKRK-WGKFAAEIRAPK----RrQRLWLGTFDTAEEAAREYDAYARQFRG 181
                                   79*****999.**********83....35************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008472.1E-12131181IPR001471AP2/ERF domain
PROSITE profilePS5103222.471132189IPR001471AP2/ERF domain
CDDcd000185.03E-26132188No hitNo description
Gene3DG3DSA:3.30.730.106.5E-28132189IPR001471AP2/ERF domain
SuperFamilySSF541711.5E-19132190IPR016177DNA-binding domain
SMARTSM003801.2E-32132195IPR001471AP2/ERF domain
PRINTSPR003673.0E-9133144IPR001471AP2/ERF domain
PRINTSPR003673.0E-9155171IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    Send to blast
MATIAVRKPA PKQKRIKTEL AGATTAPVVR KPAPPRQQRA KKAPEPPATV RRLVRIFCND  60
LDATDSSGDE ADTPGEVHLR QFVMEVRFDQ LARFDGMTST SATRAPNRGG GGGKTKPAAV  120
PAAAAGGEAE PKFRGVRKRK WGKFAAEIRA PKRRQRLWLG TFDTAEEAAR EYDAYARQFR  180
GPSAMTNFPA PSPPSPPRAA VPAAPDRVVD ISSAEESSDE STRHSPVSVL RAAEAAPLNP  240
TDAADATQQN SSSSAGQNAK GDLCPFSADA LLPQVDPDLF LFGEAAPPSL FDDEFLPKLD  300
DFLGTSSPLD LGDLPLWPDA DGGSFSDIAD DLFAGDPFPV I
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A3e-14133189663ATERF1
3gcc_A3e-14133189663ATERF1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1148153RAPKRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008650357.13e-65PREDICTED: pathogenesis-related genes transcriptional activator PTI6-like
TrEMBLK7VCH13e-65K7VCH1_MAIZE; AP2-EREBP transcription factor (Fragment)
STRINGGRMZM2G328197_P019e-65(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP131332332
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.19e-18cytokinin response factor 4